You can install solr ("the eZFind java directory") outside of the eZ Publish installation, or even on a different server - all communication between the two parties is done via http calls.
You just need to set up appropriately config settings, eg:
- solr.ini.append.php with the url where solr can be found listening - jetty xml and solrconfig.xml for the location of solr logs and data files
After moving solr to a different directory, I think you might have to reindex the whole site. Use updatesearchindexsolr.php for that.
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